CDS

Accession Number TCMCG051C24462
gbkey CDS
Protein Id XP_002311009.1
Location join(1047754..1047838,1047978..1048049,1048554..1048677,1048759..1048846,1049112..1049249,1049324..1049411,1049511..1049631,1050281..1050458)
Gene LOC7486905
GeneID 7486905
Organism Populus trichocarpa

Protein

Length 297aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002310973.3
Definition ribonuclease H2 subunit A [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category L
Description Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K10743        [VIEW IN KEGG]
EC 3.1.26.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03030        [VIEW IN KEGG]
map03030        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004521        [VIEW IN EMBL-EBI]
GO:0004523        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006271        [VIEW IN EMBL-EBI]
GO:0006273        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016891        [VIEW IN EMBL-EBI]
GO:0016893        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022616        [VIEW IN EMBL-EBI]
GO:0032299        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033567        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0043137        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAATCTGAGTCAATACTCCCCGATTGGGCATCAAAGCCTTGCATTATGGGCATAGATGAAGCTGGTCGCGGACCAGTTCTTGGACCTATGGTGTACGGATGCTTGTACTGTGCTCGCTCTTACGAGAAAACTCTCTCTACCCTCAAATTTGCAGATTCAAAGACTTTAAAAGAAGAGAAAAGGGAGGAGTTATTTGAAAAATTAAAGGCTAACGAATTGATTGGATGGGCTGTTGATGTTATTGATCCGAGGGAGCTCTCGGCTAAAATGCTTAAGAAGATCAAGATAAACCTAAATGAGATCTCGCACGATTCTGCTAGTGGCCTTGTGACTAGGGTGCTCAACATGGGAGTTCTTTTAACTGATGTGTATGTGGATACAGTGGGAGATCCTGAGAAATATAGAATAAAACTGTCTGAAAGATTTCCTTCTATCAAGTTTGTTGTTGCAAAGAAGGCTGATAGTCTTTATCCAGTCGTGAGCGGAGCAAGTATTGTTGCGAAGGTTACAAGAGACCGGGCCTTGCGAGACTGGGTACTTGATGAAACAGCTGAAAACATGACTAGGAATTTTGGGTCTGGATATCCTGGAGATCCTGAAACCAAATCTTGGTTGGAAAAACATCAACACTCGGTATTTGGATTCCCATCGTTGGTCCGCTTCAGTTGGGGTACATGCACGTCCTATTCCAAGAACATGGTTGAAGTTGTGTGGGAATCTGATAAAACGGAGGAAGATGGTTCTAGTAGTAGCAGTGGTAAGAGGCAACTAAAATTAAGCAGTTTTGGTGTCACTACATCCAAGAGGAAAAGTGAAGAAATTGAATCAAGTGGTAAAAGCCGCTGCAAGTTTTTCCAGGCTCGTAAACTAGAGCAACTTGCTAATTTCTAG
Protein:  
MESESILPDWASKPCIMGIDEAGRGPVLGPMVYGCLYCARSYEKTLSTLKFADSKTLKEEKREELFEKLKANELIGWAVDVIDPRELSAKMLKKIKINLNEISHDSASGLVTRVLNMGVLLTDVYVDTVGDPEKYRIKLSERFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWVLDETAENMTRNFGSGYPGDPETKSWLEKHQHSVFGFPSLVRFSWGTCTSYSKNMVEVVWESDKTEEDGSSSSSGKRQLKLSSFGVTTSKRKSEEIESSGKSRCKFFQARKLEQLANF